Nano-immunoEra_WP1_Design of tailored bioresponsive elements for antibody detection_Task 1.2_identification, selection and testing of antigen-NA chimera probe for antibody detection

Bagheri, Neda (2024) Nano-immunoEra_WP1_Design of tailored bioresponsive elements for antibody detection_Task 1.2_identification, selection and testing of antigen-NA chimera probe for antibody detection. University of Bologna. DOI 10.6092/unibo/amsacta/7549. [Dataset]
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Abstract

The presented dataset contains data and images produced in the framework of the Horizon Europe Nano-immunoERA project, regarding identification, selection and testing of antigen-nucleic acid (NA) chimera probe for antibody detection.Here, we show that Toehold Switch DNA hairpins, presenting a rationally designed locked protospacer adjacent motif (PAM) in the loop, can be used to control Cas12a in response to molecular inputs inclouding IgG antibodies.Reconfiguring the Toehold Switch DNA from a hairpin to a duplex conformation through a strand displacement reaction provides an effective means to modulate the accessibility of the PAM, thereby controlling the binding and cleavage activities of Cas12a.Through this approach, we showcase the potential to trigger downstream Cas12a activity by leveraging proximity-based strand displacement reactions in response to target binding.Our system enables rapid, one-pot detection of IgG antibodies and small molecules with high sensitivity and specificity

Abstract
Tipologia del documento
Dataset
Autori
AutoreAffiliazioneORCID
Bagheri, NedaUniversity of Rome Tor Vergata
Parole chiave
Biosensor, PAM, Cas12, trans-cleavage, CRISPR biosensors, strand displacement reaction
Settori scientifico-disciplinari
DOI
Contributors
Contributor
Affiliazione
ORCID
Tipo
Chamorro, Alejandro
University of Rome Tor Vergata
Researcher
Idili, Andrea
University of Rome Tor Vergata
Researcher
Bagheri, Neda
University of Rome Tor Vergata
Contact person
Porchetta, Alessandro
University of Rome Tor Vergata
Contact person
Giovanni, Valenti
University of Bologna
Contact person
Data di deposito
12 Feb 2024 10:48
Ultima modifica
12 Feb 2024 10:53
Risorse collegate
Tipologia
Relazione
Identificativo
Nome del Progetto
Nano-ImmunoEra - NANOTECHNOLOGY-ENABLED DETECTION OF CLINICALLY RELEVANT ANTIBODIES FOR EARLY CANCER DIAGNOSIS AND IMMUNOTHERAPY MONITORING
Programma di finanziamento
EC - HE
URI

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